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Stein Laboratory
This is a Web site run by Lincoln Stein at Cold Spring Harbor
Laboratory in Cold Spring Harbor, NY. My laboratory develops
software for computational biology and genome bioinformatics. Main areas of
current research are pointed to by the navigation bar above.
You may wish to visit Lincoln Stein's personal home pages, which contains software
and resources that might be of interest to general readers.
Bioinformatics Databases and Other Resources
- Genome Knowledgebase
- Generic genome browser
- Gramene database of comparative grain genomics
- Wormbase, the database of C. elegans
- SNP Consortium database of human polymorphisms
- Reverse Genetics in Maize
- Distributed Sequence Annotation System
- Arabidopsis Insertion Tagging Database
- CSHL Intensive Course in Genome Informatics
AcePerl and AceBrowser
AcePerl and AceBrowser are interfaces to the
ACEDB database. They provide the first scriptable access to a community
biological database.
- Read more about AcePerl.
- Read more about AceBrowser.
- Lists of public-access ACEDB databases
BoulderIO
BoulderIO is a flexible scheme
for describing and manipulating a wide range of biological and non-biological
data types. It is available as Perl and Java APIs (the latter
courtesy Nat Goodman's lab
at Jackson Laboratories):
- BoulderIO in Perl
- BoulderIO in Java (gzipped tar archive)
Contact Information
The mailing address for the lab is:
Lincoln Stein
Cold Spring Harbor Laboratory
Cold Spring Harbor, NY 11724
516 367-8380 (voice)
516 367-8389 (fax)
Home |
C. elegans |
AcePerl |
Jade |
Course |
DAS |
BoulderIO |
WWW |
Linux |
Lincoln D. Stein, lstein@cshl.org
Cold Spring Harbor
Laboratory
Last modified: Fri Aug 23 13:00:32 EDT 2002
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