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Genetic and Functional Genomic Approaches for the Stufy of Plant Cell Wall Degredation in Celvibrio japonicus
2012. In press. Gardner, Jeffrey G.; Keating, David H.

Biofuels and biodiversity: the implications of energy sprawl
2012. Encyclopedia of Biodiversity. Robertson, B. A.; Doran, P.J.

Conversion of hemicellulose to furfural and levulinic acid using biphasic reactors with alkylphenol solvents
2012. ChemSusChem. Gürbüz, Elif I.; Wettstein, Stephanie G.; Dumesic, James A.

Investment in Cellulosic Biofuel Refineries: Do Waivable Biofuel Mandates Matter?
2012. American Journal of Agricultural Economics. Miao, R.; Hennessy, D. A.; Babcock, B. A

Metabolic cartography: experimental quantification of metabolic fluxes from isotopic labeling studies
2012. Journal of Experimental Botany. O'Grady, J.; Schwender, J.; Shachar-Hill, Yair; Morgan, JA

Characterization, genetic variation, and combining ability of maize traits relevant to the production of cellulosic ethanol
2012. Crop Science. Lorenz, A. J.; Coors, J. G.; de Leon, N.; Wolfrum, E. J.; Hames, B. R.; Sluiter, A. D.; Weimer, P. J.

Maize (Zea mays L.) genome diversity revealed by RNA-sequencing
2012. In press. Hansey, Candice N.; Vaillancourt, B.; Sekhon, Rajandeep S.; de Leon, Natalia; Kaeppler, Shawn M.; Buell, C. Robin

Comparative deep transcriptional profiling of four developing oilseeds
2012. The Plant Journal. Troncoso-Ponce, Manuel Kilaru, Aruna Cao, Xia Durrett, Timothy; Fan, Jilian; Jensen, Jacob; Thrower, Nick; Pauly, Markus; Wilkerson, Curtis; Ohlrogge, John

Chapter 4: The cytoskeleton and root growth behavior
2012. The Plant Cytoskeleton. Advances in Plant Biology 2. Vaughn, L.M.; Baldwin, K.L.; Jia, G.; Verdonk, J.C.; Strohm, A.K.; Masson, P.H.

Exploring the potential for Actinobacteria as defensive symbionts in fungus-growing termites
2012. Microbial Ecology. Visser, Anna A.; Nobre, Tânia M.; Currie, Cameron R.; Aanen, Duur K.; Poulsen, Michael

Quantitatively understanding of reduced xylose fermentation performance in AFEXTM treated corn stover hydrolysate using Saccharomyces cerevisiae 424A (LNH-ST) and Escherichia coli KO11
2012. Bioresource Technology. Jin, M.; Balan, V. ;Gunawan, C.; Dale, B. E.

Breeding Maize for a Bioeconomy: A Literature Survey Examining Harvest Index and Stover Yield and Their Relationship to Grain Yield
2012. Crop Science. Lorenz, A. J.; Gustafson, T. J.; Coors, J. G.; de Leon, N.

Whole plant cell wall characterization using 2D-NMR
2012. Nature Protocols. Mansfield, Shawn D.; Kim, Hoon; Lu, Fachuang; Ralph, John

Hydroxycinnamate conjugates as potential monolignol replacements: In vitro lignification and cell wall studies with rosmarinic acid
2012. ChemSusChem. Tobimatsu, Yuki; Elumalai, Sasikumar; Grabber, John H.; Davidson, Christy L.; Pan, Xuejun; Ralph, John

Natural Enemies and Insect Outbreaks in Agriculture: A Landscape Perspective
2012. Insect Outbreaks. Woltz, J.M.; Werling, B. P.; Landis, D. A.

News and Views into the SNARE Complexity in Arabidopsis
2012. Frontiers in Plant Cell Biology. Sang-Jin Kim; Brandizzi, Federica

Identification of a grass-specific enzyme that acylates monolignols with p-coumarate
2012. Journal of Biological Chemistry. Withers, Saunia; Lu, Fachuang; Zhu, Yimin; Ralph, John

Effects on lignin structure of coumarate 3-hydroxylase downregulation in Poplar
2012. BioEnergy Research. Ralph, John; Akiyama, Takuya; Coleman, David C.; Mansfield, Shawn D.

Can Dispersed Biomass Processing Protect the Environment and Cover the Bottom Line for Biofuel?
2012. Michigan State University. Egbendewe-Mondzozo, Aklesso; Swinton, S. M.; Bals, B. D. ;Dale, B. E.

Landscape moderation of biodiversity patterns and processes - eight hypotheses
2012. Biology Review. Teja Tscharntke, J.M. Tylianakis, T.A. Rand, R.K. Didham, L.Fahrig, P. Batáry, J. Bengtsson, Y. Clough, T.O. Crist, C.F. Dormann, R.M. Ewers, J. Fründ, R.D. Holt, A. Holzschuh, A.M. Klein, D. Kleijn, C Kremen, D.A. Landis, W Laurance, D Lindenmayer et al

Mechanism of Proton Transfer in [FeFe]-Hydrogenase from Clostridium pasteurianum
2012. The Journal of Biological Chemistry. Cornish, Adam J.; Gärtner, Katrin; Yang, Hui; Peters, John W.; Hegg, Eric L.

Ecosystem Services and Bioenergy Landscapes
2012. Michigan State University. Werling, B. P.; Pennington, D.; Landis, D. A.

Lignification and lignin manipulations in conifers
2012. Elsevier. Wagner, Armin; Donaldson, Lloyd; Ralph, John

Effectiveness of weed management methods in establishment of switchgrass and a native species mixture for biofuels in Wisconsin
2012. Biomass and BioEnergy. Miesel, Jessica R.; Renz, Mark J.; Doll, Julie E.; Jackson, Randall D.

Importance of feedback loops between soil inorganic nitrogen and microbial communities in the heterotrophic soil respiration response to global warming
2012. Nature Publishing Group. Xu, Chonggang; Liang, Chao; Wullschleger, Stan; Wilson, Cathy; McDowell, Nathan

Soil carbon mapping using on-the-go near infrared spectroscopy, topography and aerial photographs
2012. Geoderma. Muñoz, Juan D.; Kravchenko, Alexandra

Maximizing reductant flow into microbial H2 production
2012. Ecology and Society. Dale, Virginia H.; Lowrance, Richard; Mulholland, Patrick; Robertson, G. Phillip

A polymer of caffeyl alcohol in plant seeds
2012. Proceeding of the National Academy of Sciences USA. Chen, Fang; Tobimatsu, Yuki; Havkin-Frenkel, Daphna; Dixon, Richard A.; Ralph, John

Influence of variable species composition on the saccharification of AFEX™ pretreated biomass from unmanaged fields in comparison to corn stover
2012. Biomass and BioEnergy. Garlock, Rebecca J.; Bals, Bryan; Jasrotia, Poonam; Balan, Venkatesh; Dale, Bruce E.

Soil microbial communities under model biofuel cropping systems in southern Wisconsin, USA: Impact of crop species and soil properties
2012. Applied Soil Ecology. Liang, Chao; da Ederson, Jesus C.; Duncan, David S.; Jackson, Randall D.; Tiedje, James M.; Balser, Teri C.

The Evolutionary Innovation of Nutritional Symbioses in Leaf-Cutter Ants
2012. Insects. Aylward, Frank O;. Currie, Cameron R.; Suen, Garret

Draft genome sequence of Streptomyces sp. strain Wigar10, isolated from a surface-sterilized garlic bulb
2012. Biotechnology and bioengineering. Youngquist, J. Tyler; Lennen, Rebecca M.; Ranatunga, Don R.; Bothfeld, William H.; Marner II, Wesley D.; Pfleger, Brian F.

Aqueous Phase Catalytic Processing in Biomass Valorization to H2 and Liquid Fuels
2012. CRC PRESS. Gürbüz, Elif I.; Braden, D; Dumesic, James A

Guidelines for sustainable planting and harvest of nonforest biomass in Wisconsin
2012. Journal of Soil and Water Conservation. Ventura, Stephen; Hull, Scott; Jackson, Randy; Radloff, Gary; Sample, David; Walling, Sara; Williams, Carol

Differences in drought sensitivity among prairie communities and among management histories: a remote sensing analysis of 221 prairies in the northern Great Plains
2011. Michigan State University. Morrice, J.

Effectiveness of summer mowing for weed control in plantings of native C4 prairie grasses
2011. Michigan State University. Phillippo, C.

Prairie grasses for biofuels and ecological restoration: Modifications to native species and their place in human-modified landscapes
2011. Michigan State University. Schrotenboer, A. C.

Syntheses of lignin-derived thioacidolysis monomers and their uses as quantitation standards
2011. Journal of Agriculture and Food Chemistry. Yue, Fengxia; Lu, Fachuang; Sun, Run-Cang; Ralph, John

Rapid kinetic labeling of Arabidopsis cell suspension cultures: Implications for models of lipid export from plastids
2011. Plant Physiology. Tjellstrom, Henrik; Yang, Zhenle; Allen, Doug K.; Ohlrogge, John B.

Scale-up and Integration of Alkaline Hydrogen Peroxide Pretreatment, Enzymatic Hydrolysis, and Ethanolic Fermentation
2011. Biotechnology and Bioengineering. Banerjee, Goutami; Car, Suzana; Liu, Tongjun; Williams, Daniel L.; López Meza, Sarynna; Walton, Jonathan D.; Hodge, David B.

Compartmentation of triacylglycerol accumulation in plants
2011. Journal of Biological Chemistry. Chapman, K. D.; Ohlrogge, J. B.

O-Acetylation of Arabidopsis Hemicellulose Xyloglucan Requires AXY4 or AXY4L, Proteins with a TBL and DUF231 Domain
2011. Plant Cell. Gille, Sascha; de Souza, Amancio; Xiong, Guangyan; Benz, Moniquw; Cheng, Kun; Schultink, Alex; Reca, Ida-Barbara; Pauly, Marcus

Agroenergy Crops Influence the Diversity, Biomass, and Guild Structure of Terrestrial Arthropod Communities
2011. Springer New York. Robertson, Bruce; Porter, Cody; Landis, Douglas; Schemske, Douglas

GENPLAT: an automated platform for biomass enzyme discovery and cocktail optimization
2011. Journal of Visualized Experiments. Walton, J.; Banerjee, G.; Car, S.

Measurement of absolute concentrations of individual compounds in metabolite mixtures by gradient-selective time-zero 1H-13C HSQC with two concentration references and fast maximum likelihood reconstruction analysis
2011. Anal Chem. Hu, K.; Ellinger, J. J.; Chylla, R. A.; Markley, J. L.

Biochemical and Molecular Characterization of Secreted α-Xylosidase from Aspergillus niger
2011. The Journal of Biological Chemistry. Scott-Craig, John S.; Borrusch, Melissa; Banerjee, Goutami; Harvey, Christopher M.; Walton, Jonathan D.

Insights into hydrogen bonding and stacking interactions in cellulose
2011. Journal of Physical Chemistry A. Parthasarathi, R.; Bellesia, G.; Chundawat, S. P.; Dale, B. E.; Langan, P.; Gnanakaran, S.

Crystal structure of cellobiose phosphorylase from Clostridium thermocellum in complex with phosphate
2011. Acta Crystallographica F: Structural Biology & Crystallization Communications. Bianchetti, Christopher M.; Elsen, Nathaniel L.; Fox, Brian G.; Phillips, George N., Jr.

Controls over soil microbial biomass responses to carbon amendments in agricultural systems: A meta-analysis
2011. Agriculture, Ecosystems, and Environment. Kallenbach, Cynthia; Grandy, A. Stuart

Has selection for improved agronomic traits made reed canarygrass invasive?
2011. Public Library of Science. Jakubowski, Andrew R.; Casler, Michael D.; Jackson, Randall D.

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