biowikifarm

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biowikifarm.net is a shared technical platform supporting a number of mediawiki installations used by a diverse array of projects in biology, and especially biodiversity research. The primary purpose of the shared platform is to be able to maintain the published data over a long time period and to work more efficiently and distribute administrative and maintenance work among several partners. Furthermore, the biowikifarm operates a shared media repository, enabling synergies in re-using media content.

The biowikifarm is part of the activities of Plazi. It is presently primarily maintained on ViBRANT EU FP7 funds through the Julius Kühn Institute (JKI) (programming and management) and the Botanic Garden and Botanical Museum Berlin-Dahlem (BGBM) (technical support and hosting). The IT Center of the Bavarian Natural History Collections (SNSB) is giving a guarantee for long-term online availabilty should dedicated project funds run out. In addition, users of the biowikifarm provide a significant contribution to the management of the farm.

To request a biowikifarm setup, go to Contact. See also about the biowikifarm.

This wiki, Meta, is primarily intended for documentation purposes and central discussions. The database of the metawiki also hosts the primary shared user database and may not be deactivated without moving users. Important starting pages are:

  • Software documentation
  • Current Software Maintenance (upgrade history)
  • Current Work (internal to-do and testing page)

Meta and Test wikis on the wiki farm are:

  • This Wiki (meta) (db: metawiki with SMW, ParIdx).
  • Test Wiki (db: testwiki with SMW, ParIdx).
    Test Wiki uses the staging version of mediawiki (/usr/share/mediawikistaging/phase3/, /usr/share/mediawikistaging/extensions). Code changes there do not affect other wikis. The testwiki configuration depends on its own LocalSettings.php, plus CommonsSettings and DevSettings in www-root.

Active production wikis on the wiki farm are:

  • Species-ID (db: specieswiki with SMW)
    • Open Media shared repository (db: openmedia with SMW)
    • Special Media shared repository (non-free) (db: specialmedia)
  • Offene-Naturführer.de (db: naturwiki with SMW, ParIdx)
  • orowiki.org Orobanchaceae-Wiki (db: orowiki)
  • Key to Nature
    • KeyToNature (db: k2n_wiki)
    • KeyToNature Handbook (db: k2n_handbook)
    • PMSL Wiki (db: k2n_sl)
  • diversityworkbench (db: wbwiki with)
  • LIAS glossary (db: lias_glossary)
  • LIAS checklist
    • Above is presently still the old, but active version
    • TEMP: LIAS lichen checklists (db: lias_checklist)
  • Pest Information Wiki (db: ispiwiki with SMW)
  • zsm-entomology.de (db: zsm_entomology)
  • floramalesiana.org (db: malesiana_wiki)
  • nnvm.eu (db: nnvmwiki with SMW)
  • Studienstiftung Mykologie (db: studienstiftungswiki)
  • PlantNet Wikis
    • English Plantnet terms wiki (db: plantnet_terms_en)
    • French Plantnet terms wiki (db: plantnet_terms_fr)
    • English Plantnet uses wiki (db: plantnet_uses_en)
    • French Plantnet uses wiki (db: plantnet_uses_fr)

Newly installed wikis, presently being built up:

  • wiki.gbif.de: Wiki der IT-Kommission_von_GBIF-D (db: gbif-d##check)
  • FotoFlora BB (db: fotoflorabb)
  • Hypergarden (db: hypergardenwiki)

Dormant/Inactive wikis, created for various purposes but not being active, are:

  • phytomedizin wiki (db: pmedwiki)
  • phytopathology.net (db: enwiki, a historical db name...)
  • Italian key to nature instance, presently not used, but db still exists: (db: k2n_it)
  • Rosaceae.net, not yet used (db: rosawiki)
  • French species-id instance, xper2 testing (db: species_fr)

All wikis have TitleKey and OpenID tables installed. Only old k2n have dpl_view. Only meta has the 2 ConfirmAccount tables "account_requests", "account_credentials".
Links: phpmyadmin and Administration interface

See also: Other science wikis (i. e. selected interesting wikis outside the wikimedia foundation or biowikifarm).



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This project is funded under the European Union's Seventh Framework Programme (FP7/2007-2013) under grant agreement n°261532 (ViBRANT).
Disclaimer: Information on this website is provided at the sole responsibility of the ViBRANT Project Consortium. It does not represent the opinion of the European Community and the European Community is not responsible for any use that might be made of it.
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