'Biocyc' web sites
Http://www.biocyc.org
www.biocyc.org 2013-02-14 ⚑tech
biocyc . Pathway Genome Databases and Pathway Tools Software Pathway Tools Metabolism and Phenotypes Workshop Mar 4th.6th 2013 Pathway Tools Metabolism and Phenotypes Workshop Mar 4th.6th 2013 Pathway Tools Metabolism and Phenotypes Workshop Mar 4th.6th 2013 Pathway Tools Metabolism and Phenotypes Workshop Mar 4th.6th 2013 Pathway Tools Metabolism and Phenotypes Workshop Mar 4th.6th 2013 Searching change organism database Home
www.biocyc.org 2013-02-14 ⚑tech
biocyc . Pathway Genome Databases and Pathway Tools Software Pathway Tools Metabolism and Phenotypes Workshop Mar 4th.6th 2013 Pathway Tools Metabolism and Phenotypes Workshop Mar 4th.6th 2013 Pathway Tools Metabolism and Phenotypes Workshop Mar 4th.6th 2013 Pathway Tools Metabolism and Phenotypes Workshop Mar 4th.6th 2013 Pathway Tools Metabolism and Phenotypes Workshop Mar 4th.6th 2013 Searching change organism database Home
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Http://biocyc.org/support.shtml
biocyc EcoCyc MetaCyc HumanCyc BsubCyc Pathway Tools Search Search Genes, Proteins or RNAs Search Compounds Search Reactions Search Pathways Search Growth Media Advanced Search Cross Organism Search BLAST Search Sequence Pattern Search Google Search of this Site Genome Genome Browser Genome Overview Regulatory Overview Browse Gene Ontology Metabolism Cellular Overview Dead.end Metabolites Chokepoint Reactions Metabolic Route
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Download biocyc databases and pathway tools software
www.ecocyc.org 2015-05-14 ⚑tech
biocyc Databases and Pathway Tools Software hide show operations OPERATIONS Searching change organism database Sites biocyc EcoCyc MetaCyc HumanCyc BsubCyc Pathway Tools Search Search Genes, Proteins or RNAs Search Compounds Search Reactions Search Pathways Search Growth Media Advanced Search Cross Organism Search BLAST Search Sequence Pattern Search Google Search of this Site Genome Genome Browser Genome Overview Regulatory
www.ecocyc.org 2015-05-14 ⚑tech
biocyc Databases and Pathway Tools Software hide show operations OPERATIONS Searching change organism database Sites biocyc EcoCyc MetaCyc HumanCyc BsubCyc Pathway Tools Search Search Genes, Proteins or RNAs Search Compounds Search Reactions Search Pathways Search Growth Media Advanced Search Cross Organism Search BLAST Search Sequence Pattern Search Google Search of this Site Genome Genome Browser Genome Overview Regulatory
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Http://ecocyc.org
biocyc EcoCyc MetaCyc HumanCyc BsubCyc Search Compounds Genes Proteins RNAs Reactions Pathways Growth Media Advanced Ontologies Gene Ontology MultiFun Gene Ontology Pathway Ontology Enzyme Commission Ontology Compound Ontology Google this Site BLAST Searching x25BA; change organism database Tools Genome Browser Cellular Overview Genome Overview Regulatory Overview Comparative Analysis Summary Statistics Dead.end Metabolites
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Http://ecocyc.org/ecocyc/textpresso.shtml
biocyc EcoCyc MetaCyc HumanCyc BsubCyc Pathway Tools Search Search Genes, Proteins or RNAs Search Compounds Search Reactions Search Pathways Search Growth Media Advanced Search Cross Organism Search BLAST Search Sequence Pattern Search Google Search of this Site Genome Genome Browser Genome Overview Regulatory Overview Browse Gene Ontology Metabolism Cellular Overview Dead.end Metabolites Chokepoint Reactions Metabolic Route
Bioinformatics research group at sri international
brg.ai.sri.com 2013-03-16
biocyc Collection of Pathway Genome Databases contains 1700 databases, including EcoCyc. A Model Organism Database for Escherischia coli K.12. The EcoCyc project has integrated information on the E. coli genome, and on the E. coli metabolic and genetic networks from more than 22,000 publications. MetaCyc. An encyclopedia of experimentally elucidated metabolic pathways and enzymes derived from 2,216 organisms. The Pathway Tools
brg.ai.sri.com 2013-03-16
biocyc Collection of Pathway Genome Databases contains 1700 databases, including EcoCyc. A Model Organism Database for Escherischia coli K.12. The EcoCyc project has integrated information on the E. coli genome, and on the E. coli metabolic and genetic networks from more than 22,000 publications. MetaCyc. An encyclopedia of experimentally elucidated metabolic pathways and enzymes derived from 2,216 organisms. The Pathway Tools
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Conference on predicting cell metabolism and phenotypes
biocyc , and Phenotype MicroArrays. Development of metabolic flux models with Pathway Tools. Extended capabilities developed for Pathway Tools. SRI recent and planned enhancements and improvements of Pathway Tools and biocyc . SRI recent developments on software APIs and the database schema, to educate users on how to compute with PGDBs. Biolog PM analysis software and alternative software written by Biolog users. We solicit
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Press releases. sri international
biocyc Pathway Database Collection ndash; December 10, 2012 No Clear Path to Mathematics Learning in California ndash; November 30, 2012 New Study Released on Science, Technology, Engineering, and Mathematics STEM Participation among College Students with an Autism Spectrum Disorder ndash; November 14, 2012 National Science Foundation.funded Study to Examine if New AP Science Courses Advance Student Progress onto Science and
Metacyc encyclopedia of metabolic pathways
metacyc.org 2013-03-16 ⚑tech
biocyc EcoCyc MetaCyc HumanCyc BsubCyc Search Compounds Genes Proteins RNAs Reactions Pathways Growth Media Advanced Ontologies Gene Ontology MultiFun Gene Ontology Pathway Ontology Enzyme Commission Ontology Compound Ontology Google this Site BLAST Searching x25BA; change organism database Tools Genome Browser Cellular Overview Genome Overview Regulatory Overview Comparative Analysis Summary Statistics Dead.end Metabolites
metacyc.org 2013-03-16 ⚑tech
biocyc EcoCyc MetaCyc HumanCyc BsubCyc Search Compounds Genes Proteins RNAs Reactions Pathways Growth Media Advanced Ontologies Gene Ontology MultiFun Gene Ontology Pathway Ontology Enzyme Commission Ontology Compound Ontology Google this Site BLAST Searching x25BA; change organism database Tools Genome Browser Cellular Overview Genome Overview Regulatory Overview Comparative Analysis Summary Statistics Dead.end Metabolites
Http://bsubcyc.org
bsubcyc.org 2013-03-16 ⚑tech
biocyc EcoCyc MetaCyc HumanCyc BsubCyc Search Compounds Genes Proteins RNAs Reactions Pathways Growth Media Advanced Ontologies Gene Ontology MultiFun Gene Ontology Pathway Ontology Enzyme Commission Ontology Compound Ontology Google this Site BLAST Searching x25BA; change organism database Tools Genome Browser Cellular Overview Genome Overview Regulatory Overview Comparative Analysis Summary Statistics Dead.end Metabolites
bsubcyc.org 2013-03-16 ⚑tech
biocyc EcoCyc MetaCyc HumanCyc BsubCyc Search Compounds Genes Proteins RNAs Reactions Pathways Growth Media Advanced Ontologies Gene Ontology MultiFun Gene Ontology Pathway Ontology Enzyme Commission Ontology Compound Ontology Google this Site BLAST Searching x25BA; change organism database Tools Genome Browser Cellular Overview Genome Overview Regulatory Overview Comparative Analysis Summary Statistics Dead.end Metabolites
Mgi.about the mouse genome informatics database resource
www.informatics.jax.org 2013-03-10 ⚑tech
biocyc http www. biocyc .org collection of pathway databases created at SRI International. Pathway information in MouseCyc is integrated with MGI data. See Mouse Cyc. Biochemical Pathways. Chronology of MGI Database Releases Contributing Projects Mouse Genome Database MGD , Gene Expression Database GXD , Mouse Tumor Biology MTB , Gene Ontology GO , MouseCyc Citing These Resources Funding Information Warranty Disclaimer Copyright
www.informatics.jax.org 2013-03-10 ⚑tech
biocyc http www. biocyc .org collection of pathway databases created at SRI International. Pathway information in MouseCyc is integrated with MGI data. See Mouse Cyc. Biochemical Pathways. Chronology of MGI Database Releases Contributing Projects Mouse Genome Database MGD , Gene Expression Database GXD , Mouse Tumor Biology MTB , Gene Ontology GO , MouseCyc Citing These Resources Funding Information Warranty Disclaimer Copyright
Porteco portal for e. coli research
www.porteco.org 2015-05-14
biocyc .org including curated databases for E. coli B Rel 606 and E. coli W3110 EcoliHouse provides a publicly queryable MySQL database warehouse for E. coli data Community features including colleague search, event calendar, job postings E. coli systems models at BioModels PortEco data downloads and database access PortEco also supports manual curation of Gene Ontology terms from published papers at EcoCyc PortEco News and Events
www.porteco.org 2015-05-14
biocyc .org including curated databases for E. coli B Rel 606 and E. coli W3110 EcoliHouse provides a publicly queryable MySQL database warehouse for E. coli data Community features including colleague search, event calendar, job postings E. coli systems models at BioModels PortEco data downloads and database access PortEco also supports manual curation of Gene Ontology terms from published papers at EcoCyc PortEco News and Events
Sourceforge.net biopax
biopaxwiki.org 2012-03-18 ⚑enterprise ⚑tech
biocyc . For freely available datasets visit http biocyc .org open.reg.shtml. For full dataset free to academics, fees apply to industry , visit http biocyc .org flat.file.reg.shtml. You can get the entire set of organisms in one file named biopax.owl or each individually each one also named biopax.owl. Reactome. Level 2 and Level 3 format Download link available on each pathway page or on the Reactome download page. BioModels
biopaxwiki.org 2012-03-18 ⚑enterprise ⚑tech
biocyc . For freely available datasets visit http biocyc .org open.reg.shtml. For full dataset free to academics, fees apply to industry , visit http biocyc .org flat.file.reg.shtml. You can get the entire set of organisms in one file named biopax.owl or each individually each one also named biopax.owl. Reactome. Level 2 and Level 3 format Download link available on each pathway page or on the Reactome download page. BioModels
Current release statistics uniprot embl.ebi
www.ebi.ac.uk 2014-11-14 ⚑tech
biocyc 5767363 5689926 0.07 22 Enzyme and pathway databases CAZy 73827 69376 0.01 55 Protein family group databases CGD 6763 6763 0.01 77 Organism.specific databases COMPLUYEAST.2DPAGE 4 4 0.01 109 2D gel databases CTD 462243 461028 0.01 39 Organism.specific databases ChEMBL 785 785 0.01 94 Chemistry ChiTaRS 62898 62898 0.01 56 Other ConoServer 159 159 0.01 100 Organism.specific databases DIP 3111 3106 0.01 86 Protein.protein
www.ebi.ac.uk 2014-11-14 ⚑tech
biocyc 5767363 5689926 0.07 22 Enzyme and pathway databases CAZy 73827 69376 0.01 55 Protein family group databases CGD 6763 6763 0.01 77 Organism.specific databases COMPLUYEAST.2DPAGE 4 4 0.01 109 2D gel databases CTD 462243 461028 0.01 39 Organism.specific databases ChEMBL 785 785 0.01 94 Chemistry ChiTaRS 62898 62898 0.01 56 Other ConoServer 159 159 0.01 100 Organism.specific databases DIP 3111 3106 0.01 86 Protein.protein
Uniprotkb swiss.prot release 2014 10 statistics
web.expasy.org 2014-11-14
biocyc 324527 307344 0.59 19 Enzyme and pathway databases BioGrid 40184 39823 0.07 49 Protein.protein interaction databases BRENDA 4363 4351 0.01 94 Enzyme and pathway databases CAZy 7767 6989 0.01 78 Protein family group databases CCDS 45492 33388 0.08 46 Sequence databases CGD 929 907 0.01 111 Organism.specific databases ChEMBL 6007 6007 0.01 83 Chemistry ChiTaRS 12559 12555 0.02 73 Other CleanEx 30068 29429 0.05 55 Gene
web.expasy.org 2014-11-14
biocyc 324527 307344 0.59 19 Enzyme and pathway databases BioGrid 40184 39823 0.07 49 Protein.protein interaction databases BRENDA 4363 4351 0.01 94 Enzyme and pathway databases CAZy 7767 6989 0.01 78 Protein family group databases CCDS 45492 33388 0.08 46 Sequence databases CGD 929 907 0.01 111 Organism.specific databases ChEMBL 6007 6007 0.01 83 Chemistry ChiTaRS 12559 12555 0.02 73 Other CleanEx 30068 29429 0.05 55 Gene
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Conference on predicting cell metabolism and phenotypes
biocyc , and Phenotype MicroArrays. Development of metabolic flux models with Pathway Tools. Extended capabilities developed for Pathway Tools. SRI recent and planned enhancements and improvements of Pathway Tools and biocyc . SRI recent developments on software APIs and the database schema, to educate users on how to compute with PGDBs. Biolog PM analysis software and alternative software written by Biolog users. We solicit
MORE
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Press releases. sri international
biocyc Pathway Database Collection ndash; December 10, 2012 No Clear Path to Mathematics Learning in California ndash; November 30, 2012 New Study Released on Science, Technology, Engineering, and Mathematics STEM Participation among College Students with an Autism Spectrum Disorder ndash; November 14, 2012 National Science Foundation.funded Study to Examine if New AP Science Courses Advance Student Progress onto Science and
Sourceforge.net biopax
biopaxwiki.org 2012-03-18 ⚑enterprise ⚑tech
biocyc . For freely available datasets visit http biocyc .org open.reg.shtml. For full dataset free to academics, fees apply to industry , visit http biocyc .org flat.file.reg.shtml. You can get the entire set of organisms in one file named biopax.owl or each individually each one also named biopax.owl. Reactome. Level 2 and Level 3 format Download link available on each pathway page or on the Reactome download page. BioModels
biopaxwiki.org 2012-03-18 ⚑enterprise ⚑tech
biocyc . For freely available datasets visit http biocyc .org open.reg.shtml. For full dataset free to academics, fees apply to industry , visit http biocyc .org flat.file.reg.shtml. You can get the entire set of organisms in one file named biopax.owl or each individually each one also named biopax.owl. Reactome. Level 2 and Level 3 format Download link available on each pathway page or on the Reactome download page. BioModels
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